PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082806.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 237aa MW: 26321.7 Da PI: 7.0018

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.3	3.3e-24	123	224	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD++vF + + XP_028082806.1 123 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGEIWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLR--AD 213 89**************************986445444..8999*****************************************3..47 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_028082806.1 214 NGDLCVGIRRA 224 8888**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MITVMNSIHK SMNESEECLD SQLWHACAGG MVQMPPVNSK VFYFPQGHAE HAHEKLDSGN 60 FSRIPALVLC RVSGIKFLAD TDTDEVYAKI RLVPLRNNDS DFDHDDGFLG IDKSENKEKP 120 SSFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYSAEPPV QTILAKDVHG EIWKFRHIYR 180 GTPRRHLLTT GWSNFVNQKK LVAGDSIVFL RADNGDLCVG IRRAKRGIGD GPESPSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	1e-120	ARF family protein