PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082881.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 381aa MW: 43984.4 Da PI: 5.8599

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.6	4.3e-23	65	155	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+++vGFs+rk + +k+k+++ei++rtfvC+keg r +k++ + +r+e r+gC a++ +k+++ gk++ ++++++HnH+l+p XP_028082881.1 65 DFYNTYGEKVGFSIRKLYVHKNKHTKEIISRTFVCYKEGIRGIDKQD-LLVKFPRQEVRCGCGAQFGIKLDRnLGKYVAIDFVEHHNHDLVP 155 6****************************************9999.89999**************989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MVEGGDSDGQ RMAEGCESGG DATASSRHCS HDEVIKENNV VDELANCGWK PKLGMSFDSE 60 QAAYDFYNTY GEKVGFSIRK LYVHKNKHTK EIISRTFVCY KEGIRGIDKQ DLLVKFPRQE 120 VRCGCGAQFG IKLDRNLGKY VAIDFVEHHN HDLVPQECIH MLSSQRKIST TQAIEVELAS 180 EYEIPLRSAY ELFGRESGGR ASLGFTKLDQ KNYLRSKRQK DLEYGEAGSV LQYFRKKTLE 240 NPSFYYAVQL DCDEQISNIF WADAQMIMDY AQFGYVMTFD TTYKLNNEHR PFGTFVGFNH 300 HRETVIFSAA LMYDKTAESF TWLFQIFLEL MQNAVKHVSS LFEDVGVKGV FSKFMHQIDD 360 EEEFKIQWDQ MLDRYDAHNN H

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MVEGGDSDGQ RMAEGCESGG DATASSRHCS HDEVIKENNV VDELANCGWK PKLGMSFDSE  60
QAAYDFYNTY GEKVGFSIRK LYVHKNKHTK EIISRTFVCY KEGIRGIDKQ DLLVKFPRQE  120
VRCGCGAQFG IKLDRNLGKY VAIDFVEHHN HDLVPQECIH MLSSQRKIST TQAIEVELAS  180
EYEIPLRSAY ELFGRESGGR ASLGFTKLDQ KNYLRSKRQK DLEYGEAGSV LQYFRKKTLE  240
NPSFYYAVQL DCDEQISNIF WADAQMIMDY AQFGYVMTFD TTYKLNNEHR PFGTFVGFNH  300
HRETVIFSAA LMYDKTAESF TWLFQIFLEL MQNAVKHVSS LFEDVGVKGV FSKFMHQIDD  360
EEEFKIQWDQ MLDRYDAHNN H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-66	FAR1 family protein