PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082892.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 316aa    MW: 35982.9 Da    PI: 7.6046
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082892.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.21.2e-12115166155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r+ah  +Er+RR++iN+ ++ Lr+ +P++   +s + + a+i+  A++++k+L+
  XP_028082892.1 115 QRMAHITVERNRRKQINNYLSLLRSFMPPS---YSLRGDQASIVGGAINFVKELE 166
                     79****************************...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MALETVVFQQ DPSSYNSCKD FTMIGIEEEE EEEKFNDIIK SCETIPVDKN NRIESHPRPC  60
SSMAQSVKEY CERETKSSSP EVCTTATAAP GRRKRGRGGS NKSMKKKDKE EMEKQRMAHI  120
TVERNRRKQI NNYLSLLRSF MPPSYSLRGD QASIVGGAIN FVKELEQLLQ VLEAQKQVKQ  180
RSYYPGHFSP LFPNFFTFPQ YWTHYSSQHN NLVIGHESMA GKLSTIADIE VSIVERHANI  240
KILSRRQPKQ LLKLVAGFDS LGLAIHHLNV TTTVDHMVLY SFNVKVEDDC QLSTVNEIAT  300
TVHEMMGKIQ EEAMSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116127RMAHITVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-51bHLH family protein