PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028083035.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 479aa MW: 54766.2 Da PI: 9.793

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028083035.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	84.4	2.2e-26	14	87	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 eekewyfF++rd+ky++gk++nra+++gyWk tg++k++ g++vg ++ Lvfyk +pkgekt+W+mheyrl XP_028083035.1 14 EEKEWYFFTPRDRKYKNGKQPNRAADNGYWKVTGTNKTLRF-MGADVGFRTALVFYKRITPKGEKTNWIMHEYRL 87 679**********************************99.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MVFICENVRI KPYEEKEWYF FTPRDRKYKN GKQPNRAADN GYWKVTGTNK TLRFMGADVG 60 FRTALVFYKR ITPKGEKTNW IMHEYRLPNN HPKAPTVGNE MRAGNNALSA NERTQSTQSV 120 MCQLKTESAI ITKSTMEKRI MFVLPLFTLS SIQIATSYFS VANKIGEGGF GHVHKGRLLN 180 RQKIAVKRLS RSSEQGSKEF KNEVILISRL QHRNLVRILG CCAQGEERIL IYDVIRCINN 240 VFNAKFGTDE IKRALLDWKI RVHIIEGIAQ GLQYLHKYSR ERIIHRDLTA SNILLDNDMN 300 QKISDFGTAR IFRDNESRAN RKRIVGTYGY MSPEYALYGR FSMKFDVFSF GVMMLEIICG 360 KKNTDFYIPD HASNLLGYAW DLWKDGRGLE IMDHSLVETC STSDILQCIQ IGFLCVQESA 420 VDRPTISTVL SMPSNEMVAI PAPKQPAFFA IVSLNGAYTH EIRKPCSVND VTISEVVSR

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MVFICENVRI KPYEEKEWYF FTPRDRKYKN GKQPNRAADN GYWKVTGTNK TLRFMGADVG  60
FRTALVFYKR ITPKGEKTNW IMHEYRLPNN HPKAPTVGNE MRAGNNALSA NERTQSTQSV  120
MCQLKTESAI ITKSTMEKRI MFVLPLFTLS SIQIATSYFS VANKIGEGGF GHVHKGRLLN  180
RQKIAVKRLS RSSEQGSKEF KNEVILISRL QHRNLVRILG CCAQGEERIL IYDVIRCINN  240
VFNAKFGTDE IKRALLDWKI RVHIIEGIAQ GLQYLHKYSR ERIIHRDLTA SNILLDNDMN  300
QKISDFGTAR IFRDNESRAN RKRIVGTYGY MSPEYALYGR FSMKFDVFSF GVMMLEIICG  360
KKNTDFYIPD HASNLLGYAW DLWKDGRGLE IMDHSLVETC STSDILQCIQ IGFLCVQESA  420
VDRPTISTVL SMPSNEMVAI PAPKQPAFFA IVSLNGAYTH EIRKPCSVND VTISEVVSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	1e-28	NAC family protein