PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028083319.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 328aa MW: 36684.6 Da PI: 6.1877

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028083319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.6	3.9e-12	150	197	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+L+ XP_028083319.1 150 QDHIMAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLE 197 5699**********************.....9***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MEDPGFTHQW PSNSLADINT VSIIAPSFWE NSHHSFSHPI FDLEPSMEVS SHTDINRPVK 60 ILKINSWNSS NTDHVSNPPQ ATSSPNQIPF YATQVGTLKT EDQVLSSESI ITFSSDILES 120 QGSFGNQNCV FKASQGGKRI STNTKLSNNQ DHIMAERKRR EKLSQRFIAL SAIVPGLKKM 180 DKASVLGDAI KYLKQLEERV KTLEEQVRKK PIESVIFVKK HEVCGDSEIS SSDENFSGGP 240 YDEPLPQIEA RICDKDVLIR VHCEKRKGVL EKTVEEIEKL NLSVVNCSSM TFGSAVLDIT 300 IVAQIDEEFT MQVKDLVKNL HAALKLFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	161	ERKRRE
2	157	162	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	5e-59	bHLH family protein