PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028083369.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 690aa MW: 79758.1 Da PI: 7.1805

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028083369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.9	1.4e-17	52	138	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+ Y+k GF v++++skk ++g++ t C gk++ ++++ + +++++t+Ckakl v + d+kw+++++ l+HnHel+p XP_028083369.1 52 EFYKLYGKAKGFGVSIRTSKKG-TDGKVRYVTVACCHTGKQRIRSSN---PLKLKPQSKTDCKAKLSVVLCPDEKWMLNSMILDHNHELSP 138 6**************99997.8999************9988...889999*******************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MEEVSSSSQS VELLEHNEGN IENESEKTSN VEERVEDPKV GMLFDSIDEL VEFYKLYGKA 60 KGFGVSIRTS KKGTDGKVRY VTVACCHTGK QRIRSSNPLK LKPQSKTDCK AKLSVVLCPD 120 EKWMLNSMIL DHNHELSPGK SRFYRCHRVP QSSRKRRLEL SDKTSILNNS FNSFGVDAGE 180 HQNSPFLEND CIHLVDRVKC LQLQEGDATA MNNYFLKMQV DNSNFFYMMD LDEEGRLRNV 240 LWVDARSRAA FKEFGDVVTF DTTYLVNKYD MPLALFVGMN HHGQLTLLGC ALISSEDTET 300 FTWLFQSWLT CMSGCPPSAI ITDQDQAMKK AIEIVFPNAR HRWCLWHIMK KMLEKLRGCG 360 QYESVKFCMQ NVVYDSLTKE EFEESWGRFI EKYKIERNEW LLGLYDERHR WVPAFVKDIF 420 WAGMSTTQRS ESMHAFFEGY VNSKTSLKQF LEQYENALTK KVGNENKEEF NSFKSCLPCI 480 TRYEMEKQFQ SAYTTAKFKE FQQQLIGKIY CNLSSCKEGA TISEYAVGED ISTGESHRRA 540 IFYVLFNEVT SEVNCNCRLF EYRGILCKHQ IVVLIQRMIY QVPDKYILKR WSKTVKRGHT 600 KIRICYDNWF VKPEARRFDK MCNAFHEVAD LATDTEDRCE MVMTWIHKLN GELKEAEDVC 660 GTNKPISGGL EAKVEIIIGG TSGIRASTVL

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MEEVSSSSQS VELLEHNEGN IENESEKTSN VEERVEDPKV GMLFDSIDEL VEFYKLYGKA  60
KGFGVSIRTS KKGTDGKVRY VTVACCHTGK QRIRSSNPLK LKPQSKTDCK AKLSVVLCPD  120
EKWMLNSMIL DHNHELSPGK SRFYRCHRVP QSSRKRRLEL SDKTSILNNS FNSFGVDAGE  180
HQNSPFLEND CIHLVDRVKC LQLQEGDATA MNNYFLKMQV DNSNFFYMMD LDEEGRLRNV  240
LWVDARSRAA FKEFGDVVTF DTTYLVNKYD MPLALFVGMN HHGQLTLLGC ALISSEDTET  300
FTWLFQSWLT CMSGCPPSAI ITDQDQAMKK AIEIVFPNAR HRWCLWHIMK KMLEKLRGCG  360
QYESVKFCMQ NVVYDSLTKE EFEESWGRFI EKYKIERNEW LLGLYDERHR WVPAFVKDIF  420
WAGMSTTQRS ESMHAFFEGY VNSKTSLKQF LEQYENALTK KVGNENKEEF NSFKSCLPCI  480
TRYEMEKQFQ SAYTTAKFKE FQQQLIGKIY CNLSSCKEGA TISEYAVGED ISTGESHRRA  540
IFYVLFNEVT SEVNCNCRLF EYRGILCKHQ IVVLIQRMIY QVPDKYILKR WSKTVKRGHT  600
KIRICYDNWF VKPEARRFDK MCNAFHEVAD LATDTEDRCE MVMTWIHKLN GELKEAEDVC  660
GTNKPISGGL EAKVEIIIGG TSGIRASTVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-124	FAR1 family protein