PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083373.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 262aa    MW: 29496.6 Da    PI: 7.5937
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B380.81.3e-25120220199
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f k ltpsd +++g +++pk++a+e+     +++++ +++l+ +d++g +W++++i  ++++r++l++GW+ Fv+a++L +gD ++F   + +++
  XP_028083373.1 120 FRKRLTPSDQSAHGGFSVPKRYADECfppldMSQEPPTQELVAKDLHGSEWRFRHI-YRHPKRHLLSSGWSTFVSAKKLVVGDACIFL--RGENG 211
                     889****************************555566679***************6.678889*************************..44999 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     el+v+v+r+
  XP_028083373.1 212 ELYVGVRRA 220
                     9******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MEVETENDRC NQGQKDDLHA QLWHACAGPL VNVPRAGDKV FYFPQGHIEQ VEAYSNQDGK  60
VEMPIYDLPS KILCKVVYVQ LKAEPYTDEV FAQITLLPEG PSPEHRTSQC LHQKINACPF  120
RKRLTPSDQS AHGGFSVPKR YADECFPPLD MSQEPPTQEL VAKDLHGSEW RFRHIYRHPK  180
RHLLSSGWST FVSAKKLVVG DACIFLRGEN GELYVGVRRA TKSQISIPAS VISGVSMQHG  240
ILASAFHAVS TGTMFTVYYR PW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.31e-112ARF family protein