PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083374.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 246aa    MW: 27635.5 Da    PI: 8.4791
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083374.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B386.52.3e-27103204199
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f k ltpsd +++g +++pk++a+e+     +++++ +++l+ +d++g +W++++iyr++++r++l++GW+ Fv+a++L +gD ++F   + +++
  XP_028083374.1 103 FRKRLTPSDQSAHGGFSVPKRYADECfppldMSQEPPTQELVAKDLHGSEWRFRHIYRGHPKRHLLSSGWSTFVSAKKLVVGDACIFL--RGENG 195
                     889****************************555566679************************************************..44999 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     el+v+v+r+
  XP_028083374.1 196 ELYVGVRRA 204
                     9******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MEVETENDRC NQGQKDDLHA QLWHACAGPL VNVPRAGDKV FYFPQGHIEQ VEAYSNQDGK  60
VEMPIYDLPS KILCKVVYVQ LKGPSPEHRT SQCLHQKINA CPFRKRLTPS DQSAHGGFSV  120
PKRYADECFP PLDMSQEPPT QELVAKDLHG SEWRFRHIYR GHPKRHLLSS GWSTFVSAKK  180
LVVGDACIFL RGENGELYVG VRRATKSQIS IPASVISGVS MQHGILASAF HAVSTGTMFT  240
VYYRPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.31e-104ARF family protein