PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028083381.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 414aa MW: 48101.8 Da PI: 6.5684

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028083381.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.6	2e-18	52	138	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+ Y+ke GF v++++skk ++g++ + t C gk++ ++++ + +++++t+Ckakl v + ++kw+++++ l+HnHel+p XP_028083381.1 52 EFYKLYGKEKGFGVSIRTSKKG-TDGKVRHVTVACCHTGKQRIRSSN---PFKLKTQSKTDCKAKLSVVLCPNEKWMLNSMILDHNHELSP 138 6**************99997.8999************9988...88889999*****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MEEVSSSSQS VELLEHNEGN IENESEKTSN VKEKVEDPKV GMLFDSIDEL VEFYKLYGKE 60 KGFGVSIRTS KKGTDGKVRH VTVACCHTGK QRIRSSNPFK LKTQSKTDCK AKLSVVLCPN 120 EKWMLNSMIL DHNHELSPGK SQFYKCHKVP QSSRKMRLEL SDKIGILNNS FNSFGVDAGE 180 HQNSPFLENE CIHLVDRVKC LQLREGDATT MNNYFLKMQV NNSNFFYMMD LDEEGRLRNV 240 LWVDARSRTA FKEFSDVVTF DTTYSVNKYD MPLALFVGMN HHGQLTLLGC ALISSEDTET 300 FTWLFQSWLT CMSECPPSAI ITDQDQAMKK DIEIVFPNAR HRWCLWHIMK KIPEKLKGCG 360 QYESVKFCMQ NVVYDSLTKE EFEESWDRFI EKYKIERNEW LLGLYDERHR WVTL

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MEEVSSSSQS VELLEHNEGN IENESEKTSN VKEKVEDPKV GMLFDSIDEL VEFYKLYGKE  60
KGFGVSIRTS KKGTDGKVRH VTVACCHTGK QRIRSSNPFK LKTQSKTDCK AKLSVVLCPN  120
EKWMLNSMIL DHNHELSPGK SQFYKCHKVP QSSRKMRLEL SDKIGILNNS FNSFGVDAGE  180
HQNSPFLENE CIHLVDRVKC LQLREGDATT MNNYFLKMQV NNSNFFYMMD LDEEGRLRNV  240
LWVDARSRTA FKEFSDVVTF DTTYSVNKYD MPLALFVGMN HHGQLTLLGC ALISSEDTET  300
FTWLFQSWLT CMSECPPSAI ITDQDQAMKK DIEIVFPNAR HRWCLWHIMK KIPEKLKGCG  360
QYESVKFCMQ NVVYDSLTKE EFEESWDRFI EKYKIERNEW LLGLYDERHR WVTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-77	FAR1 family protein