PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083388.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 214aa    MW: 23641.5 Da    PI: 9.4649
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000165274123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C + F ++  L  H++ H
  XP_028083388.1 52 FSCNYCQRKFYSSQALGGHQNAH 74
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MEDQKHTDLE LDLNHSDKGS KPELNLIESF NMDSSPKDHQ SFNCNEAEPR VFSCNYCQRK  60
FYSSQALGGH QNAHKRERTL AKRAHNNKIV KIDQLGSYPQ RFSSLASLPL HGSFNRSLGI  120
QVHSMIQKPT YFPSNGVSGH HGWSRKAIID QQPAIGRLPE MLVGPSSSGG AARFDGGQKF  180
SPAVVGGDGM GGGFSRLKTN HQDELQKLDL SLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.12e-42C2H2 family protein