PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028083394.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 381aa MW: 44283.2 Da PI: 7.9423

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028083394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.4	1.1e-23	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs r+ + +ks ++g+it+r+fvC+keg+r +k++ +++r+e rtgC+a+l++k ++ +k+ v++++++HnH ++ XP_028083394.1 31 DFYNTYGGRLGFSSRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-PLIKNPRQEVRTGCQARLVIKWDRnMQKFFVIDFVEQHNHIFV 119 6******************9.6667************9999.999**************999899***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEPNNHENDG GECDWKPRVR MMFDTEQEAY DFYNTYGGRL GFSSRRGYVN KSKEGQITSR 60 QFVCNKEGFR VVDKRDPLIK NPRQEVRTGC QARLVIKWDR NMQKFFVIDF VEQHNHIFVP 120 TKCTHMLPSQ RKISASQATE IDLAEKSGIR LNATFELMGN KVGGRESLGF TKLDQNNYLK 180 TKRQNSLAYG EADNEEQITN IFWADAQMIM DYGQFGDVVT FDTTYKLNSA HRPFASFVGF 240 NHHRETVIFG AALMYDETAD SFDAAMAKAI PIVMPNTTHR LCTWHLMQNA LRHANSIFKD 300 KAVKDKGMKS ILSKFMYDIE DEEEFTLKWK EMLDKYEVRD NHWLKLTFGV KEKWGWPYVR 360 NAWGAGMSST QSFDAFLKDF I

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEPNNHENDG GECDWKPRVR MMFDTEQEAY DFYNTYGGRL GFSSRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDPLIK NPRQEVRTGC QARLVIKWDR NMQKFFVIDF VEQHNHIFVP  120
TKCTHMLPSQ RKISASQATE IDLAEKSGIR LNATFELMGN KVGGRESLGF TKLDQNNYLK  180
TKRQNSLAYG EADNEEQITN IFWADAQMIM DYGQFGDVVT FDTTYKLNSA HRPFASFVGF  240
NHHRETVIFG AALMYDETAD SFDAAMAKAI PIVMPNTTHR LCTWHLMQNA LRHANSIFKD  300
KAVKDKGMKS ILSKFMYDIE DEEEFTLKWK EMLDKYEVRD NHWLKLTFGV KEKWGWPYVR  360
NAWGAGMSST QSFDAFLKDF I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-71	FAR1 family protein