PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028083522.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 346aa MW: 39037.2 Da PI: 5.2553

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028083522.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.5	3e-54	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+kveg+++el evi+ +d+yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nrat++gyWkatgkd++v+ XP_028083522.1 6 LPPGFRFHPTDEELVGYYLKRKVEGQEIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATRAGYWKATGKDRKVV 99 79**************************.99**********95344555788*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ +g +ktLvfy+grap g +tdWvmheyrl XP_028083522.1 100 C-QSGGTGYRKTLVFYRGRAPMGDRTDWVMHEYRL 133 .7778**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MAGASLPPGF RFHPTDEELV GYYLKRKVEG QEIELEVIPV IDLYKFDPWE LPEKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATRAGYWK ATGKDRKVVC QSGGTGYRKT LVFYRGRAPM 120 GDRTDWVMHE YRLCDDLSQG SPTFQGGFAL CRVVKKNELA QKTNDGYGEP KAKRIGSSSS 180 IGDFTSTGMS SEAVTVSEDT TFQMSHLGNS SNFSSPVTSP YQTTPMVESE AFSMGTNPSS 240 LWVSPDLILD SSKEYPQGQG VSAYYPQCEF PNSTTQWQTY NQYEISPSSS YSNFTEEVEL 300 GDGLSQFCSM SPYSGHTNYM GFCGNDDVQY EGYDHQTNSL RNPKHF

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MAGASLPPGF RFHPTDEELV GYYLKRKVEG QEIELEVIPV IDLYKFDPWE LPEKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATRAGYWK ATGKDRKVVC QSGGTGYRKT LVFYRGRAPM  120
GDRTDWVMHE YRLCDDLSQG SPTFQGGFAL CRVVKKNELA QKTNDGYGEP KAKRIGSSSS  180
IGDFTSTGMS SEAVTVSEDT TFQMSHLGNS SNFSSPVTSP YQTTPMVESE AFSMGTNPSS  240
LWVSPDLILD SSKEYPQGQG VSAYYPQCEF PNSTTQWQTY NQYEISPSSS YSNFTEEVEL  300
GDGLSQFCSM SPYSGHTNYM GFCGNDDVQY EGYDHQTNSL RNPKHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	1e-104	NAC family protein