PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083537.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 253aa    MW: 28654.1 Da    PI: 8.9248
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM152.42.1e-4751352128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     ppG+rF Pt+eelv++yL++k+eg++ +l+++i+ v+iy++ePw+Lpk     +++++++w+fF++r++++a+g r+nr+t++gyWkatg+   v
  XP_028083537.1   5 PPGYRFYPTEEELVSFYLHNKLEGNRPDLNRAIPVVNIYEHEPWHLPKvsgeLCRGDTEQWFFFTPRQEREARGGRPNRTTATGYWKATGSPSYV 99 
                     9****************************999***************645654444777************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s++++++g+kkt+vfykg++p+g+kt+W mheyr+
  XP_028083537.1 100 YSSDNREIGVKKTMVFYKGKSPTGKKTKWKMHEYRA 135
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MVEIPPGYRF YPTEEELVSF YLHNKLEGNR PDLNRAIPVV NIYEHEPWHL PKVSGELCRG  60
DTEQWFFFTP RQEREARGGR PNRTTATGYW KATGSPSYVY SSDNREIGVK KTMVFYKGKS  120
PTGKKTKWKM HEYRAIEAEA PSPFGSAVPK KLRHEISLCR VYVVSGSFRA FDRRPLGAET  180
SQTTSQQVHG NGAMTLAPSQ ATKTPSQATK TMESTSSPES SYSGEDPFEL PRANLGTVGG  240
QEPLWEWEQL NWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.11e-84NAC family protein