PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083801.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 252aa    MW: 28329.8 Da    PI: 6.311
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.75.4e-131555345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++++eE+   ++  +++G++ W++Ia++++ gRt++++k++w 
   XP_028083801.1 15 KFSAEEERVVIEMQARFGNK-WAAIASHLQ-GRTDNDVKNFWS 55
                     79******************.*********.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MTVDDDGGEM KSGCKFSAEE ERVVIEMQAR FGNKWAAIAS HLQGRTDNDV KNFWSSRKKR  60
LARILQSTSP PRQTKSHKSK DNALAVHEMP TLQAPEFTSP QMKEESYSKF QPCSSSSMED  120
PKMIHKMPQP NFMNPNMANI DSSQPSLNTT ETDTKPSNEI LLQLSFTHLP NSKLDLPILA  180
ESHAEPNFLD VFTSHQQQAF ELGDVSQLIN FGSPFFEVEG IGRVLLTKVT IRTTSSPQIE  240
PTYTSIQRHN DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.19e-27MYB family protein