PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083994.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 326aa    MW: 36873.6 Da    PI: 4.471
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.3e-11159202654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  XP_028083994.1 159 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 202
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MEYNENGFLE ELLALRNDSW EPTIPKGTMG EFSNNVWSSD CFNETLVSNP PNSSFHQDFS  60
LPLDQTLNYS LSEFYCPIRD EFSSNTKLDT PPPSFPTQED YSLPIIGDDE EPNLIGNAFQ  120
NLDLETVQST QVPSFNMGLG MQERKNKVKK VDGQPSKNLM AERRRRKRLN DRLSMLRSVV  180
PKISKMDRTS ILGDTIDYMK ELLERINNLQ EEIEVGNSNQ LDLVSIFKDA KPNEVMVRNS  240
PKFDVERRNI DTRVEICCGG KPGLLLSTVT TLEALGLEIQ QCVISCFNDF AMQASCSEGL  300
EQRAIIASEE IKQALFRNAG YGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162169ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-90bHLH family protein