PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028084020.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 182aa    MW: 20808.5 Da    PI: 9.9083
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028084020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.32.8e-32101159159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r+++d+ vv++tYeg H+h+
  XP_028084020.1 101 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHKGCNVKKQVQRQSKDECVVVTTYEGVHTHP 159
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MENYSMFFPC ASTLPQSSSF SSKTASSSSV PNDLYNKNPT GFLGLSMEMH LPTSSEVKHV  60
SNSSANFVVS GNEENLGKKK GEKKIRKPRF AFQTRTQVDI LDDGYRWRKY GQKAVKNNKF  120
PRSYYRCTHK GCNVKKQVQR QSKDECVVVT TYEGVHTHPI EKPSDNFEQI LSQMHIYPHP  180
FN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-52WRKY family protein