PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084049.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 305aa MW: 35448.3 Da PI: 6.5225

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71	2.8e-22	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++ F++r+++skk+k +++ ++r +vCskeg+r+ +k++ ++++raetrtg +a+l vk+++ +gk++vt+++++HnH+l XP_028084049.1 25 DFYNAYGGRMRFNIRMDYSKKNKFTNQLICRLLVCSKEGFRKVDKRD-PLSKNPRAETRTGYEARLYVKLDEcTGKFVVTDFKEKHNHDLL 114 6*****************************************999.999************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MEVENGCAWK PKQGMTFDSK QGAYDFYNAY GGRMRFNIRM DYSKKNKFTN QLICRLLVCS 60 KEGFRKVDKR DPLSKNPRAE TRTGYEARLY VKLDECTGKF VVTDFKEKHN HDLLSLECAH 120 MLPSQRKTSA TQAIELELAI QSGLYLGQSF ELMGREVGDN EEQITNMFWA DAQMIMDYAQ 180 FGDVVTFDTT YKLNKEHRPF ASFVGFNHHR KIVIFGASLL YDETVKSFIF EEFQNEYFRS 240 IESDIEAIEY GEASTIFTVV DVLRDILRMK EVPSQYIAKR WTKQARAETV KDITGNDIQV 300 DVKFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-36	FAR1 family protein