PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028084093.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 343aa    MW: 37257.6 Da    PI: 7.1915
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028084093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17246279134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_028084093.1 246 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 279
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MIGPDFIDEI DCGSFFDQID DITEFPADNE CDLGSGSGSG SGNDFQSIWS DALTGSDPIF  60
SANNSNSAAS QLSAELSLPY EDIVQLEWLS NFVEDSFSGG GMTLGKEKPS VNNESSHNQF  120
QTSSPVSVLE SSSSSSSCSR TKTTQLSPTK HGPQRARSKR PRPATFNPRP AIQLISPTSS  180
VTENLQLYPV RVTSSESENF AESHPVKKIP KAAPMEHKKR KKIKLSLPLG PVEMNQNSTS  240
QAVRKCMHCE ITKTPQWRAG PMGPKTLCNA CGVRYKSGRL FPEYRPAASP TFVPSLHSNS  300
HKKVIEMRSN GGEKSSVVMT VTTTPTTTHP ELIPNSNPSL DYI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159163KRPRP
2218222KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-40GATA family protein