PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028084155.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 246aa    MW: 27526.4 Da    PI: 7.4486
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028084155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.36.4e-092043226
                    -S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                      +lC+ff + G C++G++C+++H+
  XP_028084155.1 20 EPSLCKFFVK-GLCNRGNQCSYSHS 43
                    568*******.*************8 PP
2zf-CCCH22.81.6e-074771226
                    -S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                    k++ C+ff+    C+ Gd+C F+H+
  XP_028084155.1 47 KRSVCKFFLSLKGCRNGDKCEFSHD 71
                    8999********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
DISGNEHNYV NGDGPPAPWE PSLCKFFVKG LCNRGNQCSY SHSLQAKRSV CKFFLSLKGC  60
RNGDKCEFSH DVGPSTSSSS RPSLCLPKDE IVDAKSLLGL FPTSYDGCIL LLDDTDFHFS  120
SHLSRHYNPS KIISTTVLSA GSPLDASLSG VRILWGLSHP SQTIISKAED NPIPWSEVKC  180
VLWFPKFDSD SENLEEQKSL LQTFFKYLAI RILADELHEV QVILTMNNIR FSRLQVIVNL  240
FVKRKV