PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028084305.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 291aa    MW: 32044.8 Da    PI: 6.9562
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028084305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-10159206455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_028084305.1 159 SHSLAERARREKISERMKVLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 206
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDPPIINEAS FSAANPSSYS LAEIWPFPIN GELSRGGGGL GLRMCNFGAF AEANSNRDVS  60
VDESTVTEQS GGGRKRRDAN SEEDESSKLV STSSAKDLNS NGKRMKISRS RDENGGSKSE  120
VEANSGLENK PAEQSTKPSE PPKQDYIHVR ARRGQATDSH SLAERARREK ISERMKVLQD  180
LVPGCNKVIG KALVLDEIIN YIQSLQHQVE FLSMKLEAVN SRMNSPIEGF PSKDLLDLIQ  240
NTLLASEKSR FTRLESPIFT NSHTLIVNPK FTNKVGSSSS FFFFWSPIDS L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.14e-78bHLH family protein