PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028084308.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 269aa    MW: 29492.9 Da    PI: 5.7922
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028084308.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-10160207455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_028084308.1 160 SHSLAERARREKISERMKVLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 207
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDPPIINEAS FSAANPSSYS LAEIWPFPIN GELSRGGGGL GLRMCNFGAF AEANSNRDVS  60
VDESTVTEQS GGGRKRRDAN SEEDESSKLV STSSAKDLKN SNGKRMKISR SRDENGGSKS  120
EVEANSGLEN KPAEQSTKPS EPPKQDYIHV RARRGQATDS HSLAERARRE KISERMKVLQ  180
DLVPGCNKVI GKALVLDEII NYIQSLQHQV EFLSMKLEAV NSRMNSPIEG FPSKDLETML  240
HGLFVFWPIP VSTRYDTDMG VESGSNVTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.13e-79bHLH family protein