PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084369.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 340aa MW: 38882.9 Da PI: 9.4814

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.3e-18	19	64	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G+ +W++Ia +++ gR++k+c++rw++ XP_028084369.1 19 RGHWRPAEDEKLRQLVEQYGPQNWNSIADKLQ-GRSGKSCRLRWFNQ 64 899***************************.*********996 PP
2	Myb_DNA-binding	57.3	3.7e-18	71	114	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+++l+ a++ +G++ W++I+r ++ gRt++ +k++w+ XP_028084369.1 71 RRPFTEEEEDRLLAAHRIHGNK-WALISRLFP-GRTDNAVKNHWHV 114 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MDESTGGGGS SDDARTCPRG HWRPAEDEKL RQLVEQYGPQ NWNSIADKLQ GRSGKSCRLR 60 WFNQLDPRIN RRPFTEEEED RLLAAHRIHG NKWALISRLF PGRTDNAVKN HWHVIMARKQ 120 REQSKLCGTK RSYQDAINGG DDSSNTLSYG FRRRNSKTQQ EDYSSKTRFE SCQFFEFQTP 180 NKERIFTVLP NLPPSSSSSP SWNFTRPTIS AANNSGDLFG REGRDFFNPS SNYCTTESSN 240 NTSEQALRRY YLNPSACRDF SPFGFPNYKR VVPSSFGYSK LGDGNGTHGM FKKELVRFGE 300 NSHPFEKKRE TIDEHENGDK NSIKQKDVPF IDFLGVGISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	4e-67	MYB family protein