PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084428.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 366aa MW: 41219.2 Da PI: 6.6836

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.3	2.2e-30	71	125	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ.kYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ +YR+ XP_028084428.1 71 PRLRWTPDLHLCFVHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQqMYRS 125 9************************************************648997 PP
2	Myb_DNA-binding	48.5	2e-15	72	121	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+ XP_028084428.1 72 RLRWTPDLHLCFVHAVERLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQQ 121 89**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MKRSDSAEEH SKTISSNKNE DEDEDEGEEV DDDDDESKPK NRSSSSNSTV EGNEKKTPSG 60 SVRQYVRSKN PRLRWTPDLH LCFVHAVERL GGQDRATPKL VLQLMNIKGL SIAHVKSHLQ 120 QMYRSKKIDD PDQGQGIQFD GRDHHVYNLS QLPMLQSFNQ NASSSLRYGD ASWSTGHPKI 180 HNQIYSMGGS ASNGARRGPY SSTAEKIFGS IDRNISPNYN FHIRNSFNGL QATMKTHESQ 240 EHQLQPLQTH GSWQTQIRLM NQLQSSEKIF LSLEKNQNVM TSEEQSAAKR KVPDADCNNL 300 DLNLSLRVTQ KNDEFGKGLE DDQEVDSSLS LSLFSSSSSS KKHRRLEDSD GTRKHEITSS 360 TLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MKRSDSAEEH SKTISSNKNE DEDEDEGEEV DDDDDESKPK NRSSSSNSTV EGNEKKTPSG  60
SVRQYVRSKN PRLRWTPDLH LCFVHAVERL GGQDRATPKL VLQLMNIKGL SIAHVKSHLQ  120
QMYRSKKIDD PDQGQGIQFD GRDHHVYNLS QLPMLQSFNQ NASSSLRYGD ASWSTGHPKI  180
HNQIYSMGGS ASNGARRGPY SSTAEKIFGS IDRNISPNYN FHIRNSFNGL QATMKTHESQ  240
EHQLQPLQTH GSWQTQIRLM NQLQSSEKIF LSLEKNQNVM TSEEQSAAKR KVPDADCNNL  300
DLNLSLRVTQ KNDEFGKGLE DDQEVDSSLS LSLFSSSSSS KKHRRLEDSD GTRKHEITSS  360
TLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	1e-50	G2-like family protein