PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028084596.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 76aa    MW: 8507.47 Da    PI: 6.8021
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028084596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.11.1e-091054244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     g+WT+   + + +a + +  +   +W+ Ia+ +g g+t++++k ++
   XP_028084596.1 10 GSWTAKQNKAFEKALAVYDRDtpdRWHNIAKAIG-GKTAEEVKRHY 54
                     89*****************99*************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MASMSSHGSG SWTAKQNKAF EKALAVYDRD TPDRWHNIAK AIGGKTAEEV KRHYEILVED  60
VKNIEEGQVP FPNYTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-38MYB_related family protein