PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028084705.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 210aa    MW: 24299.4 Da    PI: 9.6312
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028084705.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.57.5e-18145177133
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                     C++C++ kTp+WR gp+g+ tLCnaCG++y+  
  XP_028084705.1 145 CRHCQSEKTPQWRMGPEGPNTLCNACGVRYKAG 177
                     ******************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MTVVGEDSYN SRDLFFDHNF DKKSSSYYEG QLCIPQDSLE DLEIFDNFSD DNISLSEFLL  60
IPEQATPGVE DCPLPFSSTE AKPEQPEERQ VEHNKMEPKA KVGRKRTRSK RRRIVDSWGR  120
KIPNNWSLSE KQSPSGGEKK RRRRCRHCQS EKTPQWRMGP EGPNTLCNAC GVRYKAGKLV  180
PEYRPAKSPS FDALKHSNFH RKILKRRGIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106111RTRSKR
2110114KRRRI
3139144KKRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.15e-34GATA family protein