PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084856.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 231aa MW: 26350.5 Da PI: 5.4105

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27	1.5e-08	34	95	30	90
FAR1 30 krtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +++ +C + ++++++k+ +++ +++ +++++Cka+++ +++kdg++++t l+leH+H++ XP_028084856.1 34 SKKGMCFISNQARNRTKRsEVNPLEPSLSSKIDCKARVRATLQKDGRYKLTILVLEHTHDFI 95 4445565555544444442467778999*******************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MDVDSMNNSF NVSEEVKEQD SNVEFNESGE VEESKKGMCF ISNQARNRTK RSEVNPLEPS 60 LSSKIDCKAR VRATLQKDGR YKLTILVLEH THDFIPSDSQ HFPMNERILT PVKRRLEVND 120 ATGIGVARNF HSIVVEAGGY EALMFDEQDA RNYIQNARRL RLGVGDAESA TFYFHKMQQQ 180 NSNFYLATDL DEDGRMRNLF WADARSRATY KAFGDVELIT TVTQFCLVVG C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	46	51	RNRTKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-24	FAR1 family protein