PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028084864.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 213aa    MW: 24352.4 Da    PI: 9.348
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028084864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.81.5e-2232125290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 
                     fYn+YAk  GFs+rks+ +++ ++g++++r + Cs+eg+r ++  +  +ek+r ++a tr+gCka+++++ +      gk++vt+++ +HnHela
  XP_028084864.1  32 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRIPKYLNrvAEKSRAPKALTRVGCKAQFRIRYDAdadeGGKYVVTHFVADHNHELA 125
                     *****************9999.666699999*********99998877899999***************9987666689**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVDDTHRNDM VGDVERAILE QKFDSVEDGE TFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  60
LWLCSREGQR IPKYLNRVAE KSRAPKALTR VGCKAQFRIR YDADADEGGK YVVTHFVADH  120
NHELAEQHCV MYLRSHRSLN SADKAQAMAM RNVGAKTSQI MDYLVNQSGS YENVGFIRTD  180
LHNHIQAERR AEVEDGVRRI RNHGPTTQSL VMC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-25FAR1 family protein