PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084960.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 170aa MW: 19885.3 Da PI: 9.62

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00027	51	69	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 +C k F+r +L H+r H XP_028084960.1 51 ICRKGFKRVASLWMHMRAH 69 7****************99 PP
2	zf-C2H2	13.5	0.00021	134	157	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ ksFs +Lk+H++++ XP_028084960.1 134 YSCNCCNkKSFSVLVDLKSHLKNC 157 99********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MDAMIISEEK SVMTLKVEDE KMKDEIGSDD WEIIELDVVK LLAEHIHSYD ICRKGFKRVA 60 SLWMHMRAHG NRFKTREAVA KPERCSSEFS RRKTRFFCPF VGCNRNKSHK KFRLLKSVIC 120 VKNHFKRSHC PKMYSCNCCN KKSFSVLVDL KSHLKNCGES KWKCSCGNEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	2e-51	C2H2 family protein