PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028085062.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 733aa MW: 85040 Da PI: 7.4866

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028085062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.5	1.6e-16	45	129	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAke GF +++++skk ge+ C+ +gk++ +++k ++ +++++t+Ckak+ ++ dgkw + +++l+HnH ++ XP_028085062.1 45 QFYQRYAKEKGFGMCIRSSKKV--GGEVRYVIVACTHSGKPKIKSSK---LHQLHPQSKTDCKAKICANLLGDGKWILRSMVLDHNHGVS 129 6***************9998..999***********99877...889999*****************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MEEVSSGSES VGLNEDHNEI EIEKAKSVED PKVGMLFDSI DDLVQFYQRY AKEKGFGMCI 60 RSSKKVGGEV RYVIVACTHS GKPKIKSSKL HQLHPQSKTD CKAKICANLL GDGKWILRSM 120 VLDHNHGVSP GKARFYRCHR VLNSAVKRRL ELHAKVGIRM NKSFNSLVVQ AGGHEKLTYL 180 EKDCRNHMDR VKRIELGEGD ATTMHNYFLK MQADNSEFFH MMDLDEEGRL RNVSWADARS 240 RAAFKEFGDV VTFDTTYLVN KYAMPFAHFV GVNHHGQSTL LGYGLISGED TETFTWLFQS 300 WLTCMSGCPS FAIITDQDQA MKNAIEVVFH NARHRGCLWH IMKKLPEKLR GYNQYEGIKF 360 SMKNVVYDSL TIGEFEESWG KFIEKYKLQS NKWLFNLYDE RHHWVPAFVK DTFWAGMSTT 420 QRSESMHAFF DGYVNSKTTL KQFVEQYENA LAKKVENENN EEFNSFNSCI PCMVGYEMEK 480 QLQSAYTTEK FKEFQRELMG KISCDLSSYK KDAYISKYEV AEDILFGESR RRVSFNVCFD 540 EDTNGVYCNC RLFEYRGILC RHQIVVFIHR KVDQIPDKYI LKRWSKNVKM SHTKVRISYD 600 NWALKPEARR FDKMCNVFYE VVDLAAVSED WSEKFIERIC EFRVCMKQDS CRSDKQISEL 660 QDNGNMHGAR VVELVKEENI HFHVIIIQLH LGGLDLEMGG VMHPNNFNGM LTMNDMAQAK 720 TLTLHKDDKS EEH

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MEEVSSGSES VGLNEDHNEI EIEKAKSVED PKVGMLFDSI DDLVQFYQRY AKEKGFGMCI  60
RSSKKVGGEV RYVIVACTHS GKPKIKSSKL HQLHPQSKTD CKAKICANLL GDGKWILRSM  120
VLDHNHGVSP GKARFYRCHR VLNSAVKRRL ELHAKVGIRM NKSFNSLVVQ AGGHEKLTYL  180
EKDCRNHMDR VKRIELGEGD ATTMHNYFLK MQADNSEFFH MMDLDEEGRL RNVSWADARS  240
RAAFKEFGDV VTFDTTYLVN KYAMPFAHFV GVNHHGQSTL LGYGLISGED TETFTWLFQS  300
WLTCMSGCPS FAIITDQDQA MKNAIEVVFH NARHRGCLWH IMKKLPEKLR GYNQYEGIKF  360
SMKNVVYDSL TIGEFEESWG KFIEKYKLQS NKWLFNLYDE RHHWVPAFVK DTFWAGMSTT  420
QRSESMHAFF DGYVNSKTTL KQFVEQYENA LAKKVENENN EEFNSFNSCI PCMVGYEMEK  480
QLQSAYTTEK FKEFQRELMG KISCDLSSYK KDAYISKYEV AEDILFGESR RRVSFNVCFD  540
EDTNGVYCNC RLFEYRGILC RHQIVVFIHR KVDQIPDKYI LKRWSKNVKM SHTKVRISYD  600
NWALKPEARR FDKMCNVFYE VVDLAAVSED WSEKFIERIC EFRVCMKQDS CRSDKQISEL  660
QDNGNMHGAR VVELVKEENI HFHVIIIQLH LGGLDLEMGG VMHPNNFNGM LTMNDMAQAK  720
TLTLHKDDKS EEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-119	FAR1 family protein