PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028085063.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 392aa MW: 44062.9 Da PI: 5.4645

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028085063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31.1	7.5e-10	96	154	38	90
FAR1 38 egkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 eg+r ++ + +ek+r ++a tr+gCka+++++ + gk++vt+++ +HnHel+ XP_028085063.1 96 EGQRLPKYLDcvAEKSRAPKALTRVGCKAQFRIRYDAdageGGKYVVTHFVADHNHELV 154 444444444466899999**************987677789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MAPAEVKREG GDYDIPNEAD DIRLMNESRA EPYHGCEVGP SNEKTTSMNV EDGGADVKKE 60 MVDDAHCNDM VGDVERAILE QKFDSVEDGE AFYNAEGQRL PKYLDCVAEK SRAPKALTRV 120 GCKAQFRIRY DADAGEGGKY VVTHFVADHN HELVEQHCVM YLRSHRSLNS ADKAQAMAMR 180 NVGVKTSRIM DYIVNQSRSY ENVGFIRTDL HNHIQAKCRA EVKDGDAQGA LVYLCAKLDV 240 DALFFYKTNA YKKPFVMLVG VTSHFRTTIF ACVLLANETI DTYTWVLETF MEEMGNKAPV 300 SILTDGDKAI FDSTYRTNAY KKPFVMLVGV TSHFRTTIFA CVLLANETID TYTWVLETFM 360 DEIGNKALVS VLTDGDKAMR EAIKRVFPDA RH

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MAPAEVKREG GDYDIPNEAD DIRLMNESRA EPYHGCEVGP SNEKTTSMNV EDGGADVKKE  60
MVDDAHCNDM VGDVERAILE QKFDSVEDGE AFYNAEGQRL PKYLDCVAEK SRAPKALTRV  120
GCKAQFRIRY DADAGEGGKY VVTHFVADHN HELVEQHCVM YLRSHRSLNS ADKAQAMAMR  180
NVGVKTSRIM DYIVNQSRSY ENVGFIRTDL HNHIQAKCRA EVKDGDAQGA LVYLCAKLDV  240
DALFFYKTNA YKKPFVMLVG VTSHFRTTIF ACVLLANETI DTYTWVLETF MEEMGNKAPV  300
SILTDGDKAI FDSTYRTNAY KKPFVMLVGV TSHFRTTIFA CVLLANETID TYTWVLETFM  360
DEIGNKALVS VLTDGDKAMR EAIKRVFPDA RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-36	FAR1 family protein