PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028085082.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 469aa MW: 55045.9 Da PI: 8.7891

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028085082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.6	1.1e-09	60	120	2	65
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkak 65 fY +YA++vGF++ ++++++ +ge + Cs+ g+r+++++ + +++ +t++gCkak XP_028085082.1 60 FYAKYAERVGFHIANRTQSTG-YEGELKYFGIECSRAGRRKKKSEV--NPLKPSLSTKIGCKAK 120 9***********9988876.8889**********998766..9999********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MRRQDGIKKR QILLLLIMEN TKIAIMEIDS NNDNPSLNRE EAEEPKRGMT FSSKEEVYTF 60 YAKYAERVGF HIANRTQSTG YEGELKYFGI ECSRAGRRKK KSEVNPLKPS LSTKIGCKAK 120 KRRLEVNDQA RIGVSSDFHS LVDVVEGYVQ LTFDERDCDD YIERAKRLRR LAVGGANLIQ 180 DYFLRMKKQN SNFFYVMNFG DDGYVRNFFW ADARSRVTYE AFGDVVTCDT TYLMNKYDLP 240 LALFVGVNHH GQSILFGCGL LSSEDTNTYV WLFKSWLSCM LGHPPKAIIT DQCSAMQNAI 300 HIVFLEARHR WCLWHVMKKL LEKLRGYSQY EPIKLALQNV VYDSFTKDEF EHKWKVMISN 360 FNLYDNEWLR GLYNERHRWV PVYAKDMFWA GMSTMEQSES MHVFFDGYVN SKTTLKQFVE 420 QCDNALTSKV EKEKKADFKS RHKLYDRLTM YGIEKQFEEA YTNAKFKEV

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MRRQDGIKKR QILLLLIMEN TKIAIMEIDS NNDNPSLNRE EAEEPKRGMT FSSKEEVYTF  60
YAKYAERVGF HIANRTQSTG YEGELKYFGI ECSRAGRRKK KSEVNPLKPS LSTKIGCKAK  120
KRRLEVNDQA RIGVSSDFHS LVDVVEGYVQ LTFDERDCDD YIERAKRLRR LAVGGANLIQ  180
DYFLRMKKQN SNFFYVMNFG DDGYVRNFFW ADARSRVTYE AFGDVVTCDT TYLMNKYDLP  240
LALFVGVNHH GQSILFGCGL LSSEDTNTYV WLFKSWLSCM LGHPPKAIIT DQCSAMQNAI  300
HIVFLEARHR WCLWHVMKKL LEKLRGYSQY EPIKLALQNV VYDSFTKDEF EHKWKVMISN  360
FNLYDNEWLR GLYNERHRWV PVYAKDMFWA GMSTMEQSES MHVFFDGYVN SKTTLKQFVE  420
QCDNALTSKV EKEKKADFKS RHKLYDRLTM YGIEKQFEEA YTNAKFKEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-86	FAR1 family protein