PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028085159.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

SRS

Protein Properties

Length: 220aa MW: 23991.8 Da PI: 8.4102

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028085159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	224.1	2.7e-69	9	166	4	154
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrel.......kskkqsalsstkl 91 +++CqdCGnqakkdC h+RCRtCCksrgf C+thvkstWvpa+krrerqqq++ +++ +++ ++ + ++++++l + k+ ++l XP_028085159.1 9 EGMNCQDCGNQAKKDCGHMRCRTCCKSRGFPCETHVKSTWVPASKRRERQQQQQHLTAFQQHPQHPHPQQQNQQLslmmrgeNPKRLRENPGARL 103 579********************************************9999999888877775555555555555655445555666667899 PP DUF702 92 ssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +s++s e+++ +lP+ev+s+avfrcvrvss+dd++ee+aYqtav+igGhvfkGiLydqG+e+ XP_028085159.1 104 PSTSSGLEVQVGHLPSEVNSPAVFRCVRVSSMDDADEEYAYQTAVNIGGHVFKGILYDQGPET 166 99*********************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MRRGGGGGEG MNCQDCGNQA KKDCGHMRCR TCCKSRGFPC ETHVKSTWVP ASKRRERQQQ 60 QQHLTAFQQH PQHPHPQQQN QQLSLMMRGE NPKRLRENPG ARLPSTSSGL EVQVGHLPSE 120 VNSPAVFRCV RVSSMDDADE EYAYQTAVNI GGHVFKGILY DQGPETHYGG GESSSGGGGA 180 QQLNLITAAT ATASNPAITM LDPSLYPFMA GTQFFPPPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	2e-65	SRS family protein