PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028085160.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SRS
Protein Properties Length: 211aa    MW: 23134.9 Da    PI: 8.2272
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028085160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF7022221.2e-6891574154
          DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskk 98 
                      +++CqdCGnqakkdC h+RCRtCCksrgf C+thvkstWvpa+krrerqqq++ +++ +++ ++ + ++++++l  +     ++ k  ++++  
  XP_028085160.1   9 EGMNCQDCGNQAKKDCGHMRCRTCCKSRGFPCETHVKSTWVPASKRRERQQQQQHLTAFQQHPQHPHPQQQNQQL--SLMMRGENPKRLRENPGL 101
                     579**************************************************9998888777766666666655..344444455555677899 PP

          DUF702  99 eletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                     e+++ +lP+ev+s+avfrcvrvss+dd++ee+aYqtav+igGhvfkGiLydqG+e+
  XP_028085160.1 102 EVQVGHLPSEVNSPAVFRCVRVSSMDDADEEYAYQTAVNIGGHVFKGILYDQGPET 157
                     9*****************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MRRGGGGGEG MNCQDCGNQA KKDCGHMRCR TCCKSRGFPC ETHVKSTWVP ASKRRERQQQ  60
QQHLTAFQQH PQHPHPQQQN QQLSLMMRGE NPKRLRENPG LEVQVGHLPS EVNSPAVFRC  120
VRVSSMDDAD EEYAYQTAVN IGGHVFKGIL YDQGPETHYG GGESSSGGGG AQQLNLITAA  180
TATASNPAIT MLDPSLYPFM AGTQFFPPPR P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.18e-64SRS family protein