PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028085256.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family TCP
Protein Properties Length: 150aa    MW: 16784.9 Da    PI: 6.9572
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028085256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP74.33.6e-232493370
             TCP  3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssa 70
                    +k ++++++h kv+gR+RR+R+++ ca ++F L + LG+ + ++tieW l+qa+p +  + ++     +   +
  XP_028085256.1 24 KKPSKSKDRHLKVNGRGRRIRIPIVCAQQVFRLNQILGHRTSGQTIEWILKQAEPTVTNILDNattvpP---S 93
                    5678899***************************************************99998653332...2 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MSPSTSSNHL SATIPTTTSQ PTHKKPSKSK DRHLKVNGRG RRIRIPIVCA QQVFRLNQIL  60
GHRTSGQTIE WILKQAEPTV TNILDNATTV PPSDPSSLAP SVAKESPTPL ENRDFEVTEP  120
GFLSVQDYDV LVNYEDDFFV NEFANMPMYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08330.13e-24TCP family protein