PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028085259.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 147aa    MW: 16507.5 Da    PI: 4.9353
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028085259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB170.91.4e-5328123297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdr+lPianv+rimk+ lP +akisk+aket+qec+sefisfvt+easdkc++ekrkt+ngdd++wal++lGf+dy++plk yl++yrelege
  XP_028085259.1  28 KEQDRLLPIANVGRIMKQLLPPHAKISKEAKETMQECASEFISFVTGEASDKCHKEKRKTVNGDDICWALGSLGFDDYAKPLKRYLNRYRELEGE 122
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     +
  XP_028085259.1 123 R 123
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MVDRECFEYN FAGASSGGAS GEEDGVIKEQ DRLLPIANVG RIMKQLLPPH AKISKEAKET  60
MQECASEFIS FVTGEASDKC HKEKRKTVNG DDICWALGSL GFDDYAKPLK RYLNRYRELE  120
GERGNQNKGI NNEEKDEPPN YDRVGCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.12e-60NF-YB family protein