PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028085347.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 456aa MW: 49813.3 Da PI: 8.9085

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028085347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.3	1.9e-16	18	119	10	128
NAM 10 tdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103 tde+lv +L++ + g l+ +v +++ y++ P++Lp + w f ++++kk a ++g+Wk g+ e+++ +++ +g + XP_028085347.1 18 TDEQLV-LHLEQIILGFFtLQNGNVTGDINPYEHLPSNLP-------DIWCFICSEQKK---------ASEHGFWKPRGEACEIFT-NSNIIGWR 94 799999.778888887654666677899999******9.......358888887665.........4579**********.999* PP NAM 104 ktLvfykgrapkgektdWvmheyrl 128 +tL fy+grap+ ++t+W+m+ey++ XP_028085347.1 95 TTLEFYEGRAPHERRTNWLMQEYSI 119 *********************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MCSAVSVLPP AEIGLYWTDE QLVLHLEQII LGFFTLQNGN VTGDINPYEH LPSNLPDIWC 60 FICSEQKKAS EHGFWKPRGE ACEIFTNSNI IGWRTTLEFY EGRAPHERRT NWLMQEYSIT 120 QKQLHSNSNP KESGLLCRVF SSGASPNREM KQKLGGAEIA GGNNFHPNRP VVPDTGSTTG 180 PGRMAESEAR RNRDDNTIPL AAAAGNIPDM DYILSGDFLE LDDLGDPESR SSFSDNSSCV 240 TLTSEECFDY LALGDLEDPI NQDEQGKDAN VKFNVAASVK PNEVVMRPAT LESLVSNNGR 300 KSPSKALDKK LLDKRVTKAG NGNEGTSLVG SNGRKLPTKA LDKKLPDKRV TKNAIKTRKA 360 GNGNEGTSLV GSNGRKLPTK ALDKKLPDKR VTKNAVKTQK AGNGNEGTSN SHNLVKSSKS 420 NKAVPVPETH PKKVPIPEGK KNPLVGMMKK LCCFPF

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MCSAVSVLPP AEIGLYWTDE QLVLHLEQII LGFFTLQNGN VTGDINPYEH LPSNLPDIWC  60
FICSEQKKAS EHGFWKPRGE ACEIFTNSNI IGWRTTLEFY EGRAPHERRT NWLMQEYSIT  120
QKQLHSNSNP KESGLLCRVF SSGASPNREM KQKLGGAEIA GGNNFHPNRP VVPDTGSTTG  180
PGRMAESEAR RNRDDNTIPL AAAAGNIPDM DYILSGDFLE LDDLGDPESR SSFSDNSSCV  240
TLTSEECFDY LALGDLEDPI NQDEQGKDAN VKFNVAASVK PNEVVMRPAT LESLVSNNGR  300
KSPSKALDKK LLDKRVTKAG NGNEGTSLVG SNGRKLPTKA LDKKLPDKRV TKNAIKTRKA  360
GNGNEGTSLV GSNGRKLPTK ALDKKLPDKR VTKNAVKTQK AGNGNEGTSN SHNLVKSSKS  420
NKAVPVPETH PKKVPIPEGK KNPLVGMMKK LCCFPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	8e-17	NAC family protein