PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028085358.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 679aa MW: 78425.9 Da PI: 7.4913

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028085358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.8	5.4e-16	49	134	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk++GF + ++++ + +ge++ C++ +r+++++ + +++ +++++Cka+++ +++kdg++++t+++leH+H+l XP_028085358.1 49 FYAKYAKHLGFAIAYRTQNVT-SDGEVKYFGIECTRARNRRKKSEV--NPLESSLSSKIDCKARVRASLQKDGRYKLTTVVLEHTHDLI 134 9**********99988777.8999******9999887765..89999********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MDIDSNNNSF NGNEKVEEED NNLSINESGE VEEPNKGMYF TSKQEVYAFY AKYAKHLGFA 60 IAYRTQNVTS DGEVKYFGIE CTRARNRRKK SEVNPLESSL SSKIDCKARV RASLQKDGRY 120 KLTTVVLEHT HDLIPSDSRY FAINKRILTP VKRKLEVNDV SGIEVARNFH SMVVEAEGYK 180 ALTFDERDAR NHIENARRLK LGIGDAESVA FYFHKMQQHN SNFYSAIDLD EDGRMRNLFW 240 ADARSRAAYK AFGDVVSFDT TYLTNKYDMP FAPFVGVNHH GQSILFGCGL LCNENTETFV 300 WLFKEWLSCM SDAPPKAIIT DQCIAMQNAI EIVFPQARHR WCLWHIMKKI PEKLRGYSQY 360 DSIKVALSNA VYDSFTKDEF EEYWQAMIAK FNLHDNEWLG VLYRERHRWI PAYVKDIFWA 420 GMSTTQRNES MNAFFDGYVN SKTTLKQFVE QYDNALRSKI EKETKANLNS RNKLYDCLTV 480 YGFEKQFRAA YTNSKFKEVQ AEIKRLMYCR ANLMKEEGSI CTYHVREAIL SGEGMNKVEF 540 VVYCNSIECE LQCMCRLFEF RGIMCAHSLS VLIERSIYEV PNKYIVSRWR KDLERGYTCI 600 PTTYTNSGVA LNPMLHTNYH KTLDEILELA TNDDEKHKVI QLGLKEIKDR VRIVESGSAS 660 NAPCTSTVPP GTSSNASNY

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MDIDSNNNSF NGNEKVEEED NNLSINESGE VEEPNKGMYF TSKQEVYAFY AKYAKHLGFA  60
IAYRTQNVTS DGEVKYFGIE CTRARNRRKK SEVNPLESSL SSKIDCKARV RASLQKDGRY  120
KLTTVVLEHT HDLIPSDSRY FAINKRILTP VKRKLEVNDV SGIEVARNFH SMVVEAEGYK  180
ALTFDERDAR NHIENARRLK LGIGDAESVA FYFHKMQQHN SNFYSAIDLD EDGRMRNLFW  240
ADARSRAAYK AFGDVVSFDT TYLTNKYDMP FAPFVGVNHH GQSILFGCGL LCNENTETFV  300
WLFKEWLSCM SDAPPKAIIT DQCIAMQNAI EIVFPQARHR WCLWHIMKKI PEKLRGYSQY  360
DSIKVALSNA VYDSFTKDEF EEYWQAMIAK FNLHDNEWLG VLYRERHRWI PAYVKDIFWA  420
GMSTTQRNES MNAFFDGYVN SKTTLKQFVE QYDNALRSKI EKETKANLNS RNKLYDCLTV  480
YGFEKQFRAA YTNSKFKEVQ AEIKRLMYCR ANLMKEEGSI CTYHVREAIL SGEGMNKVEF  540
VVYCNSIECE LQCMCRLFEF RGIMCAHSLS VLIERSIYEV PNKYIVSRWR KDLERGYTCI  600
PTTYTNSGVA LNPMLHTNYH KTLDEILELA TNDDEKHKVI QLGLKEIKDR VRIVESGSAS  660
NAPCTSTVPP GTSSNASNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-125	FAR1 family protein