PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028085372.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 236aa    MW: 26390.4 Da    PI: 4.8108
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028085372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.4e-1798147355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr +  +g+++AeIrd + ng   r++lg+f+tae Aa a+++a+ +++g
  XP_028085372.1  98 YRGVRKRL-WGKYAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAAFAMRG 147
                     9****887.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MDSPFFPYPY PEFSPQSSFT SLESSSCNNV LGFTNQTTLP FNENDSEEML LFGVITEADS  60
DHSLMGTSSS RSRDKEACSE PREELINESL SASTSNAYRG VRKRLWGKYA AEIRDSTRNG  120
VRVWLGTFDT AEAAALAYDQ AAFAMRGSSA VLNFPVEVVY ESLLTMHYGF EEGCSPVLAL  180
KKRHSMKRKR VGRKKKEREN NQTRVENVVV LEDLGADYLE ELLSLSESTT TSVGTW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181196KKRHSMKRKRVGRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-48ERF family protein