PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028085802.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 282aa    MW: 32798.8 Da    PI: 6.9192
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028085802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.81.1e-35431352103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+ye+++d+ +++++ w en n+fvv+ + ef++++Lp+yFkh+nf+SFvRQLn+YgFkk+  ++         weF+++ F+kg k+ll++
  XP_028085802.1  43 FLTKTYELVDDPLTDHIVCWGENDNTFVVWRPPEFSRDLLPNYFKHNNFSSFVRQLNTYGFKKIMADR---------WEFANECFRKGAKHLLSE 128
                     9*****************************************************************99.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+k++
  XP_028085802.1 129 IHRRKTS 135
                     ****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MAFMVERRRR RRSEEMVFSA MESDEYSESQ KGCEAVAVAA APFLTKTYEL VDDPLTDHIV  60
CWGENDNTFV VWRPPEFSRD LLPNYFKHNN FSSFVRQLNT YGFKKIMADR WEFANECFRK  120
GAKHLLSEIH RRKTSQQHHH QQHYHHHEQQ PPAPQFFQPD DNGINWIDSP LPSPKPGLDI  180
LTELAEDNQR LRRRNYMLIS ELTHMKNLYS DIVYFIQNHV KPVQNSDQTS IDAVPKLVEL  240
GTLHHQTQSL SNCQTMKNYS SCDGSETNGT VKLFGVPLCG SQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1712RRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.14e-75HSF family protein