PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028085810.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 671aa MW: 77021.1 Da PI: 7.2661

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028085810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.5	8.4e-27	41	129	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+r+++ +ksk++g +t+r+fvC keg+re++k+ + +++r+etrt+C+a ++++ ++ +kw v+k++++HnH+l XP_028085810.1 41 EFYNEYGRIVGFSIRRDYCNKSKKDGVMTSRKFVCCKEGEREKDKQY-TMIKNPRSETRTNCNAFMHISFKRdLSKWTVSKFDSNHNHPL 129 6****************************************9999.99***************998799***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MEDGIMDDGG LEGCIEEMRE LAKDKSPYLG MEFPSEEAAY EFYNEYGRIV GFSIRRDYCN 60 KSKKDGVMTS RKFVCCKEGE REKDKQYTMI KNPRSETRTN CNAFMHISFK RDLSKWTVSK 120 FDSNHNHPLH LPQCTHLMPS QRKVCDAQGI NIDIADETGI SLKASHDLIS AIAGGKEFVG 180 SHGRIRKPTY VQKDSETCSM VKQGMITDYG LFGDVVSFNT TFRTNKEYHP LALFSGFNHF 240 RMTVIFGATL LYDEATESFE WLFETFLDTM SRKKPISFFT DQDQAMAKAI SQIMPEVFHG 300 LCTFHLMQNA LKHLGYLFKS GSKFSSDLKA CIYDYENEHE LIETWNSLID KYNLQENEWM 360 KRTWRKREQW VASLYIPPIF DLFHYELDTS LCCQVKQFHE LEGEVKCVIG LYGNDEEYIV 420 EGRVEVTGLR GEKAVEKYIV LVRNLRTSEF YVVMQSKHLI EHAIKSLDRM NAMEILEMYI 480 LGQWRLDAKD CEVEKKNVIV DENDPKLFIL ARYRDLCPRM VKLATQASMH KPSYQLVDEG 540 IKELCVKVNN MMKGVGNFGT KELDADDPNF AQVKGIKKKD VGHKGRGRLK PWHEMMNKKT 600 KVISQPTRLS KTIGQSSNTT NVQNSSSSQQ QIIGQSSNIT NVQNSSLSQP QILALLLGLS 660 QKVANLPWGN E

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MEDGIMDDGG LEGCIEEMRE LAKDKSPYLG MEFPSEEAAY EFYNEYGRIV GFSIRRDYCN  60
KSKKDGVMTS RKFVCCKEGE REKDKQYTMI KNPRSETRTN CNAFMHISFK RDLSKWTVSK  120
FDSNHNHPLH LPQCTHLMPS QRKVCDAQGI NIDIADETGI SLKASHDLIS AIAGGKEFVG  180
SHGRIRKPTY VQKDSETCSM VKQGMITDYG LFGDVVSFNT TFRTNKEYHP LALFSGFNHF  240
RMTVIFGATL LYDEATESFE WLFETFLDTM SRKKPISFFT DQDQAMAKAI SQIMPEVFHG  300
LCTFHLMQNA LKHLGYLFKS GSKFSSDLKA CIYDYENEHE LIETWNSLID KYNLQENEWM  360
KRTWRKREQW VASLYIPPIF DLFHYELDTS LCCQVKQFHE LEGEVKCVIG LYGNDEEYIV  420
EGRVEVTGLR GEKAVEKYIV LVRNLRTSEF YVVMQSKHLI EHAIKSLDRM NAMEILEMYI  480
LGQWRLDAKD CEVEKKNVIV DENDPKLFIL ARYRDLCPRM VKLATQASMH KPSYQLVDEG  540
IKELCVKVNN MMKGVGNFGT KELDADDPNF AQVKGIKKKD VGHKGRGRLK PWHEMMNKKT  600
KVISQPTRLS KTIGQSSNTT NVQNSSSSQQ QIIGQSSNIT NVQNSSLSQP QILALLLGLS  660
QKVANLPWGN E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-58	FAR1 family protein