PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028085812.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 164aa    MW: 19354.2 Da    PI: 10.6727
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028085812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.23.7e-0798136138
             AP2   1 sgykGV....rwdkkrgrWvAeIrd.psengkrkrfslgkfgt 38 
                     s+y+GV     +++ +grW+ +I   +   g +k+ +lg++g 
  XP_028085812.1  98 SKYRGVareqKQHHHNGRWETRIGRvF---G-NKYLYLGTYGN 136
                     79*****99999**********99966...3.6*********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MPPSPAMRCS PIREIKGDNH KKGRSLEGRI LLREKNDNHA LFNEMKTRER DSFLLQSNDD  60
FEHTFSMKLR YLSDYKLGMN QKTKRKTRKS SGFSRGVSKY RGVAREQKQH HHNGRWETRI  120
GRVFGNKYLY LGTYGNDFAL LGKALIFLFY KWLHVKDQQV PCVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.21e-22ERF family protein