PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028085880.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 653aa MW: 75829.2 Da PI: 5.9487

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028085880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.3	8e-26	75	161	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfY++YA vGFsvrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dg +++t++e++HnHe XP_028085880.1 75 KFYCKYAGLVGFSVRKDWVNRSKVHGRVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGIYRITHFEENHNHE 161 6*****************************************999.999**********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MDRNDDDLVS SHDDDMDIRC QTSNNLDLNI EHDCCSPKVA HVGSVQSTLS SKDDSNSDGV 60 LKIGMEFESD EYAYKFYCKY AGLVGFSVRK DWVNRSKVHG RVVSRKFTCS KEGYRRKDKR 120 DVNVKKHRKE TRTGCLAHMI ITRQPDGIYR ITHFEENHNH ENVNPSNAQN LQELPSQGTI 180 DGAGVTEADS TINLERQSQL AFQLLGRQFG ARENLDYPAI DFENYLKSGR IRDLKEGEAG 240 RLLYYFQRQH FENPSFFYAI QLDVDDKISN IFWADDNMVV DYDHFGNVVC LDTTYRTQKD 300 FRPLVQFLGL NHHRQVVIFG AALMYDETID SLKWLFQTFI EAMSRKKPEA ILTDQDATII 360 QAIDSEIPET NHRVCIWQMY QNALKHLSHV TKDADSFAKV LRSCIFDHED EEDFIHAWDD 420 MVDKFTLRQN EWLRWMFREK ENWAVVYGKN SFFIDVKSTH LVENFSNNLK NYLNSDLDVL 480 QFFTHFESMV NKQRYNELEA NYDMGRCTPR LMANVVLLKH ASDLYTPKAF EVFQREYEKC 540 LNIVVNLFSE NGSLFEYKAN TYGQPREYTV TFNSSDGTVT CGCMKFEYVG ILCCHALKVL 600 DHRNIKVVPT CYILKRWTRD ARVESFRECA ISVEEESPKS ITASSVAAAS RID

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MDRNDDDLVS SHDDDMDIRC QTSNNLDLNI EHDCCSPKVA HVGSVQSTLS SKDDSNSDGV  60
LKIGMEFESD EYAYKFYCKY AGLVGFSVRK DWVNRSKVHG RVVSRKFTCS KEGYRRKDKR  120
DVNVKKHRKE TRTGCLAHMI ITRQPDGIYR ITHFEENHNH ENVNPSNAQN LQELPSQGTI  180
DGAGVTEADS TINLERQSQL AFQLLGRQFG ARENLDYPAI DFENYLKSGR IRDLKEGEAG  240
RLLYYFQRQH FENPSFFYAI QLDVDDKISN IFWADDNMVV DYDHFGNVVC LDTTYRTQKD  300
FRPLVQFLGL NHHRQVVIFG AALMYDETID SLKWLFQTFI EAMSRKKPEA ILTDQDATII  360
QAIDSEIPET NHRVCIWQMY QNALKHLSHV TKDADSFAKV LRSCIFDHED EEDFIHAWDD  420
MVDKFTLRQN EWLRWMFREK ENWAVVYGKN SFFIDVKSTH LVENFSNNLK NYLNSDLDVL  480
QFFTHFESMV NKQRYNELEA NYDMGRCTPR LMANVVLLKH ASDLYTPKAF EVFQREYEKC  540
LNIVVNLFSE NGSLFEYKAN TYGQPREYTV TFNSSDGTVT CGCMKFEYVG ILCCHALKVL  600
DHRNIKVVPT CYILKRWTRD ARVESFRECA ISVEEESPKS ITASSVAAAS RID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein