PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028085994.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 199aa    MW: 22932 Da    PI: 9.7411
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028085994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.74e-2331118189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+f C+k g+r  +k++   ++++r+e rtgC+a+l++k ++   k+ v++++++HnH +
  XP_028085994.1  31 DFYNAYGGRLGFSIRRGYVNKS-KEGQITSRQFICNKGGFRVIDKRE-PLTKNPRQEVRTGCQARLVIKWDRnIPKFFVSDFVEQHNHIF 118
                     6********************9.6666****************9999.999******************999889*************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MEPNNVENDG GDCDWKHRVR MTFDTEQEAY DFYNAYGGRL GFSIRRGYVN KSKEGQITSR  60
QFICNKGGFR VIDKREPLTK NPRQEVRTGC QARLVIKWDR NIPKFFVSDF VEQHNHIFVL  120
AECTHMLPSQ RKISASQATK IDLVEKSRIR LNAAFELVGN EVGGRESLGF TKLDQKNYLR  180
TKRQSSLAYG EAGSILQYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-28FAR1 family protein