PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028086226.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 153aa    MW: 17652.4 Da    PI: 9.6569
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028086226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.31.2e-0827922289
            FAR1 22 skrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
                    +k++g+ ++     s+ g+r++  k++++  + + +t++gCka+++ + +kd+++++t+++le nH+l
  XP_028086226.1 27 KKDDGQLKSFAIERSQAGERKK--KSEVNPLKLSLSTKIGCKARVRGNVQKDEEYKLTTVNLEYNHDL 92
                    3445545444444455555554..4556899999********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MSGRMEIDSN VGDIPSVNEG EEVEESKKDD GQLKSFAIER SQAGERKKKS EVNPLKLSLS  60
TKIGCKARVR GNVQKDEEYK LTTVNLEYNH DLILTDSRHF AMNKKILTPA KKRLEINDQA  120
RIRVSRNLYE LFIVASWFLK IMLHYLVQLL FII