PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028086252.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 213aa    MW: 24862.5 Da    PI: 7.8927
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028086252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.91.5e-26103152352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     + ++l++++kyF+ pi++AAkeL+v+lTvLK++CR+++I+RWPhRkiksl
  XP_028086252.1 103 AALELDEIQKYFDVPITKAAKELKVGLTVLKKRCRELNIMRWPHRKIKSL 152
                     57999*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MNSFMEFDLC QTPYQNNQIT HFEFKDFQDF RGGDMGFWDF NIPSFFDDIV MDTKVEIMNS  60
SSDHHLESVG GSLASNNEVQ EFAAIEREEV KRQSCGNGKS KCAALELDEI QKYFDVPITK  120
AAKELKVGLT VLKKRCRELN IMRWPHRKIK SLKSLIDNVK ELGLTREIEM LEEHRRMVEK  180
LPELELTERT KKLRQACFKA NYKKRRSLAS LSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.12e-46Nin-like family protein