PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028086304.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 159aa    MW: 17241.9 Da    PI: 10.7536
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028086304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.83.9e-202155135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ C+ttkTplWR gp g+k+LCnaCG++yrkk++
  XP_028086304.1 21 CADCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRS 55
                    ********************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MNLSQKESMS EEVNDEMKKC CADCKTTKTP LWRGGPAGPK SLCNACGIRY RKKRSAMGGL  60
NKAPEKRKER SSTSSAAATA AAATAAKNKT SSSSGDNGKG VNLSEDLRAR LMALGKEMVM  120
LQRQRSPMKK RQRISRKFGE EEKQAAFLLM ALSCGSVFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-21GATA family protein