PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028086327.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ARR-B
Protein Properties Length: 703aa    MW: 77289.3 Da    PI: 6.7596
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028086327.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.92.3e-28206259155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+g+t+e+v+SHLQkYRl
  XP_028086327.1 206 KPRVVWSIELHRKFVAAVNQL-GIEKAVPKRILDLMNVEGITRENVASHLQKYRL 259
                     79*******************.********************************8 PP
2Myb_DNA-binding346.7e-11208258148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+ +g t++++ s++qky+
   XP_028086327.1 208 RVVWSIELHRKFVAAVNQLGIEkaVPKRILDLMNvEGITRENVASHLQKYR 258
                      678***********************************************7 PP
3Response_reg76.78.2e-26231311109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+ + ++ll  +l+k +y +v+++ +++ al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+++++++ + +  G
  XP_028086327.1  23 VLAVDDDLTCLRLLDGLLRKCQY-HVTTTNQAKMALKMLRENKnrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDPKLVMKGITHG 115
                     799********************.***************888888*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l+Kp+ +eel++
  XP_028086327.1 116 ACDYLVKPVRIEELRN 131
                     **************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    
MTIEEIRGHL RDESDKFPVG MRVLAVDDDL TCLRLLDGLL RKCQYHVTTT NQAKMALKML  60
RENKNRFDLV ISDVHMPDMD GFKLLELVGL EMDLPVIMLS ANSDPKLVMK GITHGACDYL  120
VKPVRIEELR NIWQHVIRRK KFESKNQNKS STQDMAHQGN GEGGQGGPTT TGNSDQNGKL  180
NRKRKDEEEE GEENENDSDD PSSQKKPRVV WSIELHRKFV AAVNQLGIEK AVPKRILDLM  240
NVEGITRENV ASHLQKYRLY LKRISSVATQ QANIVAALGG KDSSYMRMSL LDGLGDYRTL  300
SGSGRLSNPA LSSYQTGGML GRLNSPSGMS LRSLSPSSLI QPSHTQNLGN SIAILGKLQP  360
VVSAANQNSS LFQGISTPLE LDQLQQSKCT SSHITEFNSG DDATFFTSAG TLSDNRVSVG  420
SSRNSLPGAS SNPLILHGNP QQTQGGGVFS NQSALKVNSL NSEPFDAGLS VSNFLDNGRR  480
NENWQSTIHL SKFSSNGLPL SEPFNHNQLP PNNMRNNNSS ITPCIQSDFS STNSISALVE  540
DSRGEIQCQQ AGLAGYVVQH RNQAIGQRWG EHKQDYTQNP NNVFSTWNSI IPANGVMGPL  600
SQSLDQNNGF CNRKIDASSV SQSNSRASTF PQFSEIEKSA MDTKMRSNED YILEQTKSHG  660
GFVHNGYDSL DDLMNAMIKR EQNGTGLMDG EFGFDAYSFG SCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-114ARR-B family protein