PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028086505.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 397aa MW: 46489.7 Da PI: 7.9379

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028086505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.8	1.9e-09	47	93	45	91
FAR1 45 kkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 kk++++ +++ +t++gCkak++ +++kdg++++t++ leHnH+l+p XP_028086505.1 47 KKSEVNPLKPSLSTKIGCKAKVRASLQKDGRFMLTTIILEHNHDLFP 93 333456788999********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MEIDSNNDNP SLNREEAEEP KRGMTFSSKE EVYTFYAKYA ERGGGKKKSE VNPLKPSLST 60 KIGCKAKVRA SLQKDGRFML TTIILEHNHD LFPTDFRHFK SNKRLHTSMK RRLEVNDQAG 120 IGVSSDFHSL VDVVEGYVQL TFDERDCDDY IERAKRLRRL AVGGANLIQD YFLRMKKQNS 180 NFFYVMNFGD DGYVRNFFWA DARSRVTYEA FGDVVTFDTT YLMNKYDLPL ALFVGVNHHG 240 QSILFGCGLL SSEDTNTYIV FPEARHRWCL WHVMKKLLEK LRGYSQYEPI KLALQNVVYD 300 SFTKDEFEHK WKVMISNFNL YDNEWLRGLY NERHRWVPVY AKDMFWAGMS TMEQSESMHV 360 FFDGYVNSKT TLKQFVEQCD NALTSKVEKE NKADFKS

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MEIDSNNDNP SLNREEAEEP KRGMTFSSKE EVYTFYAKYA ERGGGKKKSE VNPLKPSLST  60
KIGCKAKVRA SLQKDGRFML TTIILEHNHD LFPTDFRHFK SNKRLHTSMK RRLEVNDQAG  120
IGVSSDFHSL VDVVEGYVQL TFDERDCDDY IERAKRLRRL AVGGANLIQD YFLRMKKQNS  180
NFFYVMNFGD DGYVRNFFWA DARSRVTYEA FGDVVTFDTT YLMNKYDLPL ALFVGVNHHG  240
QSILFGCGLL SSEDTNTYIV FPEARHRWCL WHVMKKLLEK LRGYSQYEPI KLALQNVVYD  300
SFTKDEFEHK WKVMISNFNL YDNEWLRGLY NERHRWVPVY AKDMFWAGMS TMEQSESMHV  360
FFDGYVNSKT TLKQFVEQCD NALTSKVEKE NKADFKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-79	FAR1 family protein