PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028086729.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 288aa    MW: 32500.7 Da    PI: 6.6324
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028086729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.8e-10161209255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+ + + +r RR ri ++++ L+ellP++     k   Ka+ L   +++Ik+Lq
  XP_028086729.1 161 RQRATATDRTRRMRIAERLDALKELLPQP-----KEGGKASLLDDIIDHIKYLQ 209
                     788899**********************9.....5588999************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEGQYGHENY LRLMSLDFGG NTNHVSHSYQ DNPNQQHIMP AGRNQMLPVD LPLPHWIHCQ  60
QTSHSYVKYL AESGASEIQR EMSHNKLGVA SNFTPTDSSI GMDVWKGVKY TRPHNEGGLM  120
NNFTSAEYQI HVQKQESNEP HPGVAVEAQG FSSKLRNRIS RQRATATDRT RRMRIAERLD  180
ALKELLPQPK EGGKASLLDD IIDHIKYLQL QIKDLSRSRL GGESTSDSFI FLEGYGHYLL  240
QELMLNEPLE EMIGKLLQVN PLAATELLES RGLVIMPTAF AEGLHQSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.18e-17bHLH family protein