PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028086743.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 275aa    MW: 30908.9 Da    PI: 6.7091
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028086743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.4e-10148196255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+ + + +r RR ri ++++ L+ellP++     k   Ka+ L   +++Ik+Lq
  XP_028086743.1 148 RQRATATDRTRRMRIAERLDALKELLPQP-----KEGGKASLLDDIIDHIKYLQ 196
                     788899**********************9.....5588999************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MSLDFGGNTN HVSHSYQDNP NQQHIMPAGR NQMLPVDLPL PHWIHCQQTS HSYVKYLAES  60
GASEIQREMS HNKLGVASNF TPTDSSIGMD VWKGVKYTRP HNEGGLMNNF TSAEYQIHVQ  120
KQESNEPHPG VAVEAQGFSS KLRNRISRQR ATATDRTRRM RIAERLDALK ELLPQPKEGG  180
KASLLDDIID HIKYLQLQIK DLSRSRLGGE STSDSFIFLE GYGHYLLQEL MLNEPLEEMI  240
GKLLQVNPLA ATELLESRGL VIMPTAFAEG LHQSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.16e-17bHLH family protein